Detailed information of matrix profile UN0205.1

  1. Home
  2. Matrix > UN0205.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ZNF580
Matrix ID: UN0205.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9UK33  
Source: 28473536
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 67 18 1 2 7 123 6 6 29 34 101 6 2 1 14 121 0 7 ]
C [ 4 8 2 0 6 4 4 27 30 10 3 4 4 1 0 3 1 43 ]
G [ 48 110 120 120 28 21 119 99 18 61 44 113 121 121 24 35 112 106 ]
T [ 17 16 6 6 121 4 5 39 43 18 26 12 6 10 121 0 17 30 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0205.1 UN0205 1 ZNF580 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0206.1 UN0206 1 ZNF580 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0206.2 UN0206 2 ZNF580 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: